rs31929873 SNP Detail

Summary

• ID
  rs31929873
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100575638 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAA GGGAAACCAA GATTTACACT
  R
  TGTGCGTGAA TGTTTTGCCT ATTTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39341765	mCV22765583	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss148477513	ENSMUSSNP4227503	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31929873					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100575638 () rs orientation: forward

Symbol	Name	Function Class
Cela1	chymotrypsin-like elastase family, member 1	within coordinates
Rr509796	regulatory region 509796	794 bp distal
Rr509797	regulatory region 509797	885 bp proximal
Rr509798	regulatory region 509798	1095 bp proximal
Tssr136473	transcription start site region 136473	327 bp downstream
Tssr136474	transcription start site region 136474	357 bp downstream
Tssr136475	transcription start site region 136475	416 bp downstream
Tssr136476	transcription start site region 136476	1078 bp downstream