rs31931792 SNP Detail

Summary

• ID
  rs31931792
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148372100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGACATTAA ACACGCTCCC
  GCAGACCGAA GCTGCAGCCC GTCCCCAGCG TGTTGGTGCA AGCTTCGGGG GCGCAGGGAC
  AAGCTCTGAG ATCTGAACTC TGTCCCATTA GCCGGCTTTC TCAGGGCGTT GAGGCCGGGG
  GTGGCCTGAG AGCGAGAGAA CTTCCCGCAC TCCCCCCTCT CCCCGCCCCC AGACCGGGCG
  Y
  ATGTGGCACG TTAGACCCTT CCCCTCTCCA GAGTAGCGCA TCCCCAGTCC CGATGGCGCC
  CAGGGGCAGT CTCACTCACC TCGCTGGCTG AGCCGAGCTA GGCTGATACA CGGGTGCCGC
  AGGGGTTAAG GGGCTTCGGC CACCCCGCGG CGAACACTTG TCCCTTGAGG GTAATTTCAG
  GAGGAAAGGT CCTCAGAGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45587169	mCV24938272	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148000218	ENSMUSSNP5797972	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31931792					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148372100 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15301	CpG island 15301	within coordinates
Disp3	dispatched RND transporter family member 3	within coordinates
Gm68159	predicted gene, 68159	624 bp upstream
Rr604639	regulatory region 604639	within coordinates
Rr604640	regulatory region 604640	312 bp proximal
Rr604641	regulatory region 604641	511 bp proximal
Rr604642	regulatory region 604642	635 bp proximal
Rr604643	regulatory region 604643	654 bp proximal
Rr604644	regulatory region 604644	768 bp proximal
Rr604645	regulatory region 604645	934 bp proximal
Tssr44603	transcription start site region 44603	284 bp downstream