rs31934288 SNP Detail

Summary

• ID
  rs31934288
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:144413421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGA GGTCGGGGTC TGGTGGCAGA
  S
  TGGGGTTAGT CCCGGAGAGC CCTAT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46084955	mCV24316461	ABI	CRAMUS_MOUSE	f	SNP	G	G	C	G
ss145992452	ENSMUSSNP679866	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322484921	CHEV_7_152045589	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31934288					SNP	G	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:144413421 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20003	CpG island 20003	1240 bp proximal
Fgf4	fibroblast growth factor 4	1702 bp upstream
Rr366757	regulatory region 366757	within coordinates
Rr381621	regulatory region 381621	615 bp downstream
Tssr70358	transcription start site region 70358	1694 bp upstream