rs31934600 SNP Detail

Summary

• ID
  rs31934600
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:15895463 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGTACTTTG ATTGTGTACG TATGTTCATC ATGTGCGTGT
  AGTGTCTGCG AAGGCCAGAA GGGGGCTTTG GATACCCAGA ACAAGGCAAT CGTGGGCCAC
  R
  CAATGGATAC TGGGAACTGT ACCCTGCCGG GTCAATGTTC TTAATCTCCA AGCCGTCTGT
  CTCTCCAGCT CCTGATTTAT AATTTTAAGC ATTCCTCAT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46085403	mCV27566783	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss148378203	ENSMUSSNP1605734	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss322108794	CHEV_7_16746887	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31934600					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:15895463 () rs orientation: forward

Symbol	Name	Function Class
Rr155078	regulatory region 155078	within coordinates
Rr160786	regulatory region 160786	538 bp proximal
Rr164335	regulatory region 164335	519 bp distal
Slc8a2	solute carrier family 8 (sodium/calcium exchanger), member 2	475 bp downstream
Tssr64587	transcription start site region 64587	1344 bp downstream
Tssr64588	transcription start site region 64588	1328 bp downstream