rs31936979 SNP Detail

Summary

• ID
  rs31936979
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:189775494 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGCA TAGATGAAGA AAGTGAGGCA
  Y
  GGGGACCATT TGCCATCCGC TCAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45087802	mCV22788325	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T	C
ss146494474	ENSMUSSNP5943180	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31936979					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189775494 () rs orientation: forward

Symbol	Name	Function Class
Gm39736	predicted gene, 39736	within coordinates
Rr425901	regulatory region 425901	1780 bp distal
Rr425902	regulatory region 425902	796 bp distal
Rr425903	regulatory region 425903	558 bp distal