rs31938776 SNP Detail

Summary

• ID
  rs31938776
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:170794036 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTACC TTGGACAGTG ATGGTGACAG
  K
  CTTGGACTGG TGCAGTGTCC TTCCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45087822	mCV24426933	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	G	G
ss146149149	ENSMUSSNP3776246	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		G
ss320115064	CHEV_1_172896598	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31938776					SNP	T	T	T	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170794036 () rs orientation: forward

Symbol	Name	Function Class
D1Mit147	DNA segment, Chr 1, Massachusetts Institute of Technology 147	1390 bp distal
Fcgr2b	Fc receptor, IgG, low affinity IIb	within coordinates
Rr20521	regulatory region 20521	1365 bp proximal
Rr372438	regulatory region 372438	516 bp upstream
Tssr14956	transcription start site region 14956	656 bp upstream
Tssr14957	transcription start site region 14957	18 bp downstream
Tssr14958	transcription start site region 14958	1737 bp downstream