rs31941208 SNP Detail

Summary

• ID
  rs31941208
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120685990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCTCCTCAGT GATAGGTTGG
  TGCCTGCAAT GAGACAGCAC ATTGTGTTTG GAATGTTTAG TGGCGCATAA CTGCTCATCT
  CACCTGCCAG AAAGCAGGAG AGGAAGAGGG AGGCTCTGGA ATGCCACATC TCCTCTGAGA
  ACAGCCTTAG TGACCCAACA GAGAACATTT CCACAAAGGT TCCTCTCAAA GGCTCCACTA
  M
  GTCCCATGGA AGATGTGGCA TCCTGGGAAC CAAGCCTTTA ACATGAGCTT TGGAGGTGAG
  GGAAGTGGGG CATCCAAACC ACAGTTCCAT TCTTCACTCA GGAGCTGCAC AAATCGGGCA
  GCTATCTGAA TTGACCTCAC TGCCTGCGGC TGTGTCCGCA GCACCTTTCT CATCCAGGCT
  GACTTCCCGA TACAGCCACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss46085484	mCV27548767	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss145826784	ENSMUSSNP6074117	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31941208					SNP	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120685990 () rs orientation: forward

Symbol	Name	Function Class
Otoa	otoancorin	within coordinates
Rr153325	regulatory region 153325	790 bp distal
Rr159723	regulatory region 159723	11 bp proximal
Rr168965	regulatory region 168965	391 bp distal