rs31941366 SNP Detail

Summary

• ID
  rs31941366
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:171489226 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAA AGAAGTTCCA CTTCCTGTTC
  W
  CATCAGCTGT GGGGTGACGA TTTCT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45088009	mCV24408112	ABI	CRAMUS_MOUSE	f	SNP	A	T
ss120001896	PARCsnp_1.15025	PARC_SEQ	INBRED	f	SNP		T	A
ss120004196	PARCsnp_1.04366	PARC_SEQ	INBRED	f	SNP		T	A
ss146171884	ENSMUSSNP4774813	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320120240	CHEV_1_173591789	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31941366					SNP	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:171489226 () rs orientation: forward

Symbol	Name	Function Class
Gm70589	predicted gene, 70589	within coordinates