rs31943735 SNP Detail

Summary

• ID
  rs31943735
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:75104988 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGCA CCAGGGCATG CACTTAGCAC
  M
  GTGCTCAATG GATGTTTGTT AAATA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45088197	mCV23611678	ABI	CRAMUS_MOUSE	f	SNP	A	C	A	A
ss144691857	ENSMUSSNP1683951	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A
ss319795819	CHEV_1_75124918	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31943735					SNP	A	C	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:75104988 () rs orientation: forward

Symbol	Name	Function Class
Slc23a3	solute carrier family 23 (nucleobase transporters), member 3	within coordinates
Tssr7483	transcription start site region 7483	206 bp upstream
Tssr12338	transcription start site region 12338	233 bp downstream
Tssr12339	transcription start site region 12339	257 bp downstream
Tssr12340	transcription start site region 12340	299 bp downstream