rs31947478 SNP Detail

Summary

• ID
  rs31947478
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:126652725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAA TTAATTAATT AATTAATTTA
  R
  TACTGTCACA TCAGGAAAAT CACTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45588880	mCV22606908	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss147411313	ENSMUSSNP6703017	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31947478					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:126652725 () rs orientation: forward

Symbol	Name	Function Class
AU040320	expressed sequence AU040320	within coordinates
Tssr39021	transcription start site region 39021	1928 bp downstream
Tssr39022	transcription start site region 39022	1919 bp downstream