rs31947770 SNP Detail

Summary

• ID
  rs31947770
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:84587752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTTTATA CTCCCAGTCT
  GTTGGAAAAC CCATCCACCA CCCCTGCTCA CCCGGACTGA TTGGGACCCC CAGTTGGCAC
  TGCCCAGATG CATACTCAAC CACCTGGAGG ATGGATGGGG TCACCATGTG CCCTCCTGCC
  CACCCCACCC TTGGTGCCCA CACTTACCCA GGAAAATGTG AAACCAGCGG GCTCTGCCTA
  K
  GCCAGCCCAG CCTGGCCTCC GGAGTGACGG GACTCAAGCC ACAGTCAGAC CTGCCTGCCT
  GCCTCCCTCT GCTCTGGGTG GCCACAAAAT AGGAAGGCAT GAAATAAATT TACAGCCCCA
  GACTCCTGTC TGCCCCCTGG TGTCCTTCTG GGACCTCCCC CCACCCACCC AACCACCCAA
  CTTCCCTGAC TTCGCTTTCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss39343877	mCV24773965	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss325039426	CHEV_15_84533981	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs31947770					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:84587752 () rs orientation: forward

Symbol	Name	Function Class
Prr5	proline rich 5 (renal)	within coordinates
Rr304870	regulatory region 304870	1152 bp distal
Rr304871	regulatory region 304871	49 bp proximal
Rr314877	regulatory region 314877	953 bp distal
Rr314878	regulatory region 314878	1813 bp proximal
Rr404546	regulatory region 404546	1210 bp downstream