rs31950386 SNP Detail

Summary

• ID
  rs31950386
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:120151241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATGCTT TGGGGGGGGG
  GAACACTTTA AGATACCAGG CTCAGAGTAT TTGAAGGTCA CATAGCCAAC AAATTTGTTT
  CCAAAACATA CAAAGAATTA TCAAAACACA ATTTTAAAAA GAAGAACAGG CAGACACTTG
  GATAGACAAG CTTCTGAAGA CAATATACAG AAGCAGATCA GAACATTTCA GCACACATGG
  W
  CATTGGGGAA ATGTGCATTC GGTCCTCAGT GAGATGCCAC TACACAGCTA AAGTAAAATC
  ACTGCACCAA ATTTTGGTGA AGTGAGAGAA TTGGCCTTGC CGGTTAAAAT ATACAGCCTC
  CTTGGAGAAC AATGCAATAG ATTTTTAAAT ATGAATATAA ACATGTATTT TATTTCAGTA
  GCTCCAATCC TAAATTTTAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46087729	mCV24274135	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A	A
ss145822369	ENSMUSSNP3280587	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31950386					SNP	A	A	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:120151241 () rs orientation: forward

Symbol	Name	Function Class
Gm32916	predicted gene, 32916	1017 bp upstream
Rr654730	regulatory region 654730	832 bp proximal
Tssr68785	transcription start site region 68785	1021 bp upstream
Tssr68786	transcription start site region 68786	1042 bp upstream