rs31950793 SNP Detail

Summary

• ID
  rs31950793
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:191177629 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTATTTATT TATTTATTTA TCTATCTATT TATTTATTTA
  TTTAGAGACA GGGTTTCTCT GTGTAGCCCC GACTGCCCTG AAATTGGCTA TGTACACCAA
  K
  TTGTCAGACT CAGAGACATC TGCCTGCCTC TGCCTTTGGC GCCCTGGGAT TAAAGCCATG
  TGCCACCATG CCCAGCAATC TTAGTTACAT CTGCTGTTG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45089095	mCV23930621	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss146505960	ENSMUSSNP390863	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
ss320195296	CHEV_1_193269311	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs31950793					SNP	T	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:191177629 () rs orientation: forward

Symbol	Name	Function Class
Gm32200	predicted gene, 32200	within coordinates
Rr372646	regulatory region 372646	205 bp upstream
Tssr15793	transcription start site region 15793	371 bp downstream