rs31951014 SNP Detail

Summary

• ID
  rs31951014
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43861874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGCTTAAA AGATGGGGCT
  TGATTCTGTC AGGCAATCTT GATTCCCATA ACAACAGCCA GTACCAAGGT CTTCTCTAGA
  TAAAATTTTC TCTGCTGTTC CCATGTTACC TTGGCCAAGT CAGTTTCTCT CAAAAAACCT
  AAATGTCTTT CAATTCTAAA ATTGTTCTTA GTTATCAGAC TGCTTCTAGA ATTCTCTTTT
  W
  AATAACTGTT TCCTTGACTA TACTGGCATG AAACAAATTT TCTATGTCTT TATTGCTGAA
  GAACATGTGA TACTCATCTA TTCTCACAGA TACATTTTTT GGATCCATTG TTTCTTCATT
  TTAACATTAA TGCTAAATTA TGATAGTGCC AATTTCAACA TCATGCACAT AAACCTGTTA
  TCCACAGCTG TCTTGTCCAC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49295131	NES12688992	PERLEGEN	MM_PANEL2	f	SNP	A	A	T	A	T	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31951014					SNP	A	A	T	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49295131	NES12688992	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43861874 () rs orientation: forward

Symbol	Name	Function Class
Rr345822	regulatory region 345822	1274 bp distal
Rr356243	regulatory region 356243	1406 bp distal
Spink1	serine peptidase inhibitor, Kazal type 1	within coordinates