rs31951020 SNP Detail

Summary

• ID
  rs31951020
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43861318 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGAACAGA AAGTTTGGGA
  AGAACAAGGT ATGTTCAGAT GCATTTATTC AACGAACCCA CTTGCCAAAC ATTACGGTAG
  CCATAACAGA GTTCAAAATC TTGACTTTCA GCAAGGCCCA CCTTTTCGAA TGAGGACAGG
  CTCTATGCGT TTCCTGTAGA AGAGATTTAA GGAAAATAAA TTAAGGGTCA GCTTGAATTT
  W
  ACTGGCACAA ATAAGTGACT ATGGGAGAAT AGAAATGAAA CTTTAAAATA ATTCTACCTT
  TCTTTAAAAG ACAGGCTTAT GATTTATTCG GTTTTCCCTC TTTCTAATCC ATTTATTCAT
  TTGTGTATTC ATTGAGTAAT TGCTGCTTTT TATCATGTCC ACACGGGATA CAAGAGAGTA
  GAAAAACTGT AGGTCATTGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49295137	NES12688986	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	T	T	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31951020					SNP	A	A	A	A	A	T	T	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49295137	NES12688986	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43861318 () rs orientation: forward

Symbol	Name	Function Class
Spink1	serine peptidase inhibitor, Kazal type 1	within coordinates