rs31951021 SNP Detail

Summary

• ID
  rs31951021
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43861115 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCTCCTTC TCAGGTTACT
  TCTTGGGCAT GGCATAGGCC ACCTTCTTCA TCCTAACACA AACTCTATTC ATTACACATG
  CTCATGCTCA ACTGTGTGGT GTTGTCATTT GTGATGTCTG AGAGCACGAG GAAGTAACTG
  GTGGAGCTTA GTCTAGTCTG GGTCTTTCCC CAATTCCATG TCCTCAATAT ACTCATCCAC
  R
  CCTTTGAACA GAAAGTTTGG GAAGAACAAG GTATGTTCAG ATGCATTTAT TCAACGAACC
  CACTTGCCAA ACATTACGGT AGCCATAACA GAGTTCAAAA TCTTGACTTT CAGCAAGGCC
  CACCTTTTCG AATGAGGACA GGCTCTATGC GTTTCCTGTA GAAGAGATTT AAGGAAAATA
  AATTAAGGGT CAGCTTGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49295138	NES12688985	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31951021					SNP	G	G	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49295138	NES12688985	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43861115 () rs orientation: forward

Symbol	Name	Function Class
Spink1	serine peptidase inhibitor, Kazal type 1	19 bp downstream