rs31951023 SNP Detail

Summary

• ID
  rs31951023
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43860816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATTCTAT TATTGAATAT
  AGACATGGGG GAATCTTACA GTAGGGGGCT ATTATCTAGA ATTCCCATTG AAGAAAGACA
  AGGCATGATC CACAAGAGGT GAATGTGGTT AAAAGAAGGT CAGCCAGATC AAAAAGAATA
  CCCTTGCAAC TTGTCTGCTG GGCTGTTCAT CAAGCAACTT TACTCTTCTA AGTTTATTTA
  M
  AGGAAAAGAG TAACTGCAGA GTTGTGGTAG CTCACATGTG AAACCATGTG GGGTACACAA
  AGCACTAACA CTCATTTCCT TCAATAAACG CCCCCCCCTT TCTCCTTCTC AGGTTACTTC
  TTGGGCATGG CATAGGCCAC CTTCTTCATC CTAACACAAA CTCTATTCAT TACACATGCT
  CATGCTCAAC TGTGTGGTGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	NZW/LacJ	WSB/EiJ
ss49295140	NES12688983	PERLEGEN	MM_PANEL2	f	SNP	C	A	C	C
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	NZW/LacJ	WSB/EiJ
rs31951023					SNP	C	A	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49295140	NES12688983	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43860816 () rs orientation: forward

Symbol	Name	Function Class
Rr345822	regulatory region 345822	216 bp distal
Rr356243	regulatory region 356243	348 bp distal
Rr393629	regulatory region 393629	1857 bp downstream
Spink1	serine peptidase inhibitor, Kazal type 1	318 bp downstream