rs31951964 SNP Detail

Summary

• ID
  rs31951964
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:43860511 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTCAAGG CAGGAATACT
  GGAATATCAC CAGAAGTGGG TAACTAGGCA ACTCGGCTTT CCTAGTGTAT TTCTGATATC
  CTTGGTTATT TCTGGCTCAG TGGCTGACCA ATTCCCCACC AAACTACAGA CCCTGACACA
  GCCGCACCTG TGTTAGCTCT CTACCATCTT TCCAGCTGAG ACTTTTTTTT TTGGTTCTCA
  R
  AATCTCAAGA TGCTTTCCCT TTTTATTTTT AAGTAGTTGT AGATATTTTT CATCTTGAGA
  ACATTTCCTT GTTTCTAATT AATTTGACTA TATTCTATTA CATCTATATT CTATTATTGA
  ATATAGACAT GGGGGAATCT TACAGTAGGG GGCTATTATC TAGAATTCCC ATTGAAGAAA
  GACAAGGCAT GATCCACAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	WSB/EiJ
ss49295141	NES12688982	PERLEGEN	MM_PANEL2	f	SNP	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	MOLF/EiJ	WSB/EiJ
rs31951964					SNP	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49295141	NES12688982	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:43860511 () rs orientation: forward

Symbol	Name	Function Class
Rr393629	regulatory region 393629	1552 bp downstream
Spink1	serine peptidase inhibitor, Kazal type 1	623 bp downstream