rs31955755 SNP Detail

Summary

• ID
  rs31955755
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:97275432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGCCTTTGAG ACACCGGGTC TCCTCTCATC CCCTCTGTTA
  CTGGAGGGGA AACCGAGGCT CAGAGAAATG AGTTTCCAGA CTGAGACCAG TATGGCACTG
  Y
  TGTTTCTTGG AGCATTTTCC TTCCCCTGTT AGACAGATTA TAGTGGAACT TGAAGTGACG
  AATCGAGATG GTGAGGTTAA AATTCGCATC GCTGTATGC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss39345143	mCV23202539	ABI	CRAMUS_MOUSE	f	SNP		C						T
ss63608348	NES17040097	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	T	T	C	T	T	C	T	T
ss148436765	ENSMUSSNP1341504	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31955755					SNP	T	C	C	C	C	C	T	T	C	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63608348	NES17040097	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:97275432 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7620	CpG island 7620	240 bp distal
Pced1b	PC-esterase domain containing 1B	within coordinates
Rr391162	regulatory region 391162	within coordinates
Tssr132866	transcription start site region 132866	849 bp downstream
Tssr132867	transcription start site region 132867	376 bp downstream
Tssr132868	transcription start site region 132868	355 bp downstream