rs31959163 SNP Detail

Summary

• ID
  rs31959163
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82984456 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGGGCGGTGT CGCTTGAAGG GGCGGGGCTG GCGCTAAAAC
  TGGGGCTAAG GAGACGGAAG CCGGTGGGGA CGGGAAGGAC CTGGAGGGAA AGTCCTGAGC
  S
  GGACGCAAGA GGCGGGGCGT GAGCTTCTGA GTCCTTCCAG TTCCTGTGAC CTCCTCAGCG
  AGGAGTGACA GCCTCACCGA CCAGAGCAAT GGGTGAAAA                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39345195	mCV22803371	ABI	CRAMUS_MOUSE	f	SNP	G	G	C
ss148234860	ENSMUSSNP5783648	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31959163					SNP	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82984456 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7437	CpG island 7437	within coordinates
Gm17206	predicted gene 17206	1817 bp downstream
Rr308146	regulatory region 308146	1745 bp proximal
Rr312184	regulatory region 312184	within coordinates
Rr404540	regulatory region 404540	within coordinates
Serhl	serine hydrolase-like	within coordinates
Tssr132408	transcription start site region 132408	45 bp downstream
Tssr132409	transcription start site region 132409	26 bp upstream
Tssr132410	transcription start site region 132410	51 bp upstream