rs31959962 SNP Detail

Summary

• ID
  rs31959962
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:104491350 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTATTATTC CAACAGATCT
  GCACCCCCAG GTTCAAAGTC CAACCCCTCC CTAATGACTA CCCATGCAGA GGGAAGCAGA
  CATTCAGCCT ATGACTCCCA GGACCCACCA TTATGTTACA GGCCAAAAAA CTAGCCAATT
  AGATGCTTGC ACAGTAACCT ACACCCCTAT GCTTGCTGAT TACTGTAAAC CCTTACCCTG
  M
  GAGATATTCA TGGCTCATTA TCCCCAAAGC CTTCCTCCTG GACAGTGGCT CACAGTGGTG
  CCCTAGCTAG CTGGCATAAA AAGGTCTCAC AGTGATTGCA TCTCATCGGT TCCTGTCTGG
  TTTGGGGGGA TAACTACTCT TTCCTGGCAC TACACATGCA AGCTACAAAA GGCCTTATTA
  TGAGACTCAA CTTCTTAGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47108705	NES11603437	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	C	C	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31959962					SNP	A	A	A	A	A	A	A	A	A	A	C	C	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47108705	NES11603437	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:104491350 () rs orientation: forward

Symbol	Name	Function Class
Tssr74029	transcription start site region 74029	438 bp downstream
Usp17lb	ubiquitin specific peptidase 17-like B	within coordinates