rs31961539 SNP Detail

Summary

• ID
  rs31961539
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:81109298 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTCTGTT CCTACTCCTC
  TACAATGGCC ATCTGGGTCA TCTCCCAAGC TGGGAGTGGG TCAGAGCACT AGGCCCTCTA
  TCCAGCCAGG TATAATGGAT ATTATTTTGA ACTGTACAGC AATATTTGGG GAATTCCCCA
  TATGATGGGT CCTTTTTTCC CAAAGAGCTT ATGAAGGAAA CCAAGGCAAA TTGCCAGCTA
  Y
  TAATGAGAAC TAGGCTCTGC TCAGACTTAG GAAAACACTG TGGGAAGAGG TCTGTGGGGA
  TGCCTAAGTA GTTAAAGGGA TTGCAAGGCA AGTGGAAAGA CCCCCAGACC CACACAAATA
  CTGTATCAGT GTGGCATCCT GCCTGTAATA CCATCCTGGG AAGGTGAAGG CAGGATTTCC
  AGAGCAAGCT GGCTGGGGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46088553	mCV25422195	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss145158299	ENSMUSSNP3719372	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31961539					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:81109298 () rs orientation: forward

Symbol	Name	Function Class
Ap3b2	adaptor-related protein complex 3, beta 2 subunit	849 bp downstream
Cpeb1os1	cytoplasmic polyadenylation element binding protein 1, opposite strand 1	1544 bp downstream