rs31961903 SNP Detail

Summary

• ID
  rs31961903
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:137546124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTA CATTCCTTTC TCAGAGACTG
  Y
  GTGGAGTTTA AAGTCCACAT GACAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48108388	NES11849921	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	C	T	T	T	T	C	C	T	T	C	T
ss133873188	ENSMUSSNP5063346	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31961903					SNP	T	T	T	T	C	T	T	T	T	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48108388	NES11849921	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:137546124 () rs orientation: forward

Symbol	Name	Function Class
Eps8	epidermal growth factor receptor pathway substrate 8	within coordinates
Rr640222	regulatory region 640222	892 bp distal
Rr640223	regulatory region 640223	within coordinates
Rr640224	regulatory region 640224	1097 bp proximal
Rr640225	regulatory region 640225	1881 bp proximal
Tssr63894	transcription start site region 63894	1620 bp downstream
Tssr63895	transcription start site region 63895	1659 bp downstream
Tssr63896	transcription start site region 63896	1686 bp downstream
Tssr63897	transcription start site region 63897	1881 bp downstream
Tssr63898	transcription start site region 63898	1912 bp downstream