rs31964111 SNP Detail

Summary

• ID
  rs31964111
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:115872911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACAAAGAA AACAAGCAAG CAAAACCACC ACCTTTGGCT
  TCTAGCCCTG AAACCCCAAA GGTAGTTTCC CTTGTTGAAA AAGTTAAATT TGGTATCTGA
  K
  GGTAGATCTT GATCCAGGAA GTTGTGCAAA CAGCATTTGC ATTTTAGAGC CAAAACTTCT
  GCCCTAAAAC ATTCTTTGAA AAAAGGATCC TTGCCAGGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45591123	mCV25138431	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss147277406	ENSMUSSNP4244791	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss321276769	CHEV_4_115688319	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31964111					SNP	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:115872911 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14625	CpG island 14625	1474 bp proximal
Faah	fatty acid amide hydrolase	within coordinates
Rr91642	regulatory region 91642	1511 bp distal
Rr99792	regulatory region 99792	89 bp proximal
Tssr38488	transcription start site region 38488	65 bp upstream
Tssr38489	transcription start site region 38489	1551 bp upstream
Tssr42842	transcription start site region 42842	1942 bp downstream