rs31964625 SNP Detail

Summary

• ID
  rs31964625
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19046504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGTC TTGGAGGAAA CTGTTCCATA
  W
  CTCCTGGTCC AGCCCAAAAT CTAAA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46089086	mCV25049458	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A
ss148472689	ENSMUSSNP3358897	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
ss322116884	CHEV_7_19897928	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31964625					SNP	T	T	A	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19046504 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18468	CpG island 18468	1822 bp distal
Gm57205	predicted gene, 57205	1396 bp downstream
Rr643090	regulatory region 643090	1349 bp distal