rs31969372 SNP Detail

Summary

• ID
  rs31969372
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:116846546 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGGG CCTAAACAGA GATGTAATGA
  M
  CAGTTGGAAG ATTCCTCACA TCACA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45591483	mCV24651374	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss147282977	ENSMUSSNP2831085	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss321278612	CHEV_4_116661954	CHEVERUD	SCREENING_POP	f	SNP				A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31969372					SNP	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:116846546 () rs orientation: forward

Symbol	Name	Function Class
Tssr42934	transcription start site region 42934	804 bp downstream
Tssr42935	transcription start site region 42935	1010 bp downstream
Urod	uroporphyrinogen decarboxylase	615 bp downstream
Zswim5	zinc finger SWIM-type containing 5	85 bp downstream