rs31969718 SNP Detail

Summary

• ID
  rs31969718
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68258674 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCATTTAAA AGCCAATGGC
  ACACTATCAT AAGTTATTTG AAAAATCAAT CATGCCTTGG AATAAATGTT ATAAAAAGAA
  AATATAATTG AAGAAGTGAT ATGATAAACC CATGGGAAAA CCTATAATAG AAAGATATAA
  TAATCAATAT ACCATGTAAA AAAACACCTG TAAATTATTA ACAGCTGAAG AAGATAAATT
  W
  AAAAAAATAG ACTTTTATTT AAGTGGTAAA GACTCATTGT TGTTAATTAT AAGAACTTCA
  ACAGTACATA TTGAATCCTG GCACTAGTAC ATGTTATTCC AATAATATCG CACTCAACTA
  CTTTGAAATA TGTTATTTAG AATCTTGCAA CTCTGTCTTA ATTTTAAAAT GTATTGTTTA
  AATTATTAAT GTGAAAACAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45592292	mCV24164820	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss146487467	ENSMUSSNP4865055	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31969718					SNP	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68258674 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	633 bp upstream