rs31971637 SNP Detail

Summary

• ID
  rs31971637
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:25778694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGTGACGT TGCTACCTGA
  GTGTATCTCT TGTCTTAAAC ACTGGGGCTC ATGAGGATTT CAGGTTCTGG AGTTTTTCAT
  ATTGGAATCT CTTATCTGCC TGGCCTCTCC TGATTGGCAG TCAGAAATTC AAAAGTACCC
  CAAGATCTGA ATTTTTTTCT GTACTGAACA TTGATTTCTC CTACCCCAGT ACTTGTTCAT
  R
  CATCCTATAT CCTACACATA AGTTCTACCT CCTACCTGCA TCCCTAGCCC AGGAATCTGA
  ATGAAGATCT ACTTCATTTT ATATTTATGA GTGTTTTGTC TTATGTATCT ACTTCCTATT
  ACCGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTACGCG TGTTTGATAG CTATGTGGGT
  GCTAGGAATT GAACCCTGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss39347445	mCV22644390	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss147356420	ENSMUSSNP4858982	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31971637					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:25778694 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6971	CpG island 6971	1266 bp proximal
Myo10	myosin X	within coordinates
Tssr130836	transcription start site region 130836	468 bp downstream
Tssr130837	transcription start site region 130837	1391 bp upstream