rs31975219 SNP Detail

Summary

• ID
  rs31975219
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:137887351 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCAAA ACTCATAGAA AAAGTCATAA
  W
  TTTTCATATT TCATATTCAA ATATG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45091734	mCV25030718	ABI	CRAMUS_MOUSE	f	SNP	A	A	T
ss145574709	ENSMUSSNP3333752	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss319999602	CHEV_1_139856190	CHEVERUD	SCREENING_POP	f	SNP				A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31975219					SNP	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:137887351 () rs orientation: forward

Symbol	Name	Function Class
C530045E16Rik	RIKEN cDNA C530045E16 gene	within coordinates
Gm4258	predicted gene 4258	within coordinates
Gm26936	predicted gene, 26936	within coordinates
Gm41959	predicted gene, 41959	within coordinates
Mir181a-1hg	Mir181a-1 and Mir181b-1 host gene	within coordinates
Tssr9129	transcription start site region 9129	882 bp upstream
Tssr9130	transcription start site region 9130	1857 bp upstream