rs31982125 SNP Detail

Summary

• ID
  rs31982125
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19596527 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACTG TTGAGCAATC TCTCCAGTCC
  Y
  CTCTCTTCTC TTCAACAAGA ATTTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss46091039	mCV22884389	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss148485982	ENSMUSSNP4585769	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31982125					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19596527 () rs orientation: forward

Symbol	Name	Function Class
Ceacam16	CEA cell adhesion molecule 16	1303 bp upstream
Gm44659	predicted gene 44659	within coordinates
Rr643320	regulatory region 643320	1594 bp proximal
Tssr71042	transcription start site region 71042	1377 bp upstream
Tssr71043	transcription start site region 71043	1360 bp upstream
Tssr71044	transcription start site region 71044	1303 bp upstream