rs31982786 SNP Detail

Summary

• ID
  rs31982786
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:83921767 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCA GAAGCAGGCA GGACCAGAGA
  W
  CACCAGAGAA GCAACAACAA TATCC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39348422	mCV25424128	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	A	T
ss148244498	ENSMUSSNP1763480	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	A
ss325037837	CHEV_15_83867996	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31982786					SNP	T	T	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:83921767 () rs orientation: forward

Symbol	Name	Function Class
Efcab6	EF-hand calcium binding domain 6	within coordinates
Rr308220	regulatory region 308220	366 bp distal
Rr308221	regulatory region 308221	within coordinates
Rr308222	regulatory region 308222	234 bp proximal