rs31983481 SNP Detail

Summary

• ID
  rs31983481
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:138800675 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCTCTTGTCT TGAGTCACAG TCAGCTGCTC CCAGATTGCT GCTGCTCCCA GTCCTCATTG
  GCTGTTCCCT TCTGAGCAGA TGGGAGGAGC ACTACAGCAA AGCCAATGAG CTGGGTCAGG
  GCAGCTGCAG TAACTGCCTC TGTGCACATC ACGTTAAGCT TCTTGGGGCA GAAGAAATAG
  GTCAGTGGTT GAAAAAGCTT TCTGGGGAGC AGGCTAGGCT CTCTGTAAAC ACCCACATGG
  ACAGTTCTTG ACTCTCTGTG ACTCTAGTTT CAGAGGATCT GACACCCTCT TCATTCATAT
  R
  TGTATATATA TATATATATA TATATATATA TATATATGGT TTGTTTTTTT TTGAGACAGG
  GTTTCTCTGT GTAGCCCTAG CTGTCCTGGA ACTCACTTTG TAGACCAGGC TGGCCTCGAA
  CTCAATCTGC CTGCCTCTGC CTCCCGAGTG CTGGGAGTGC CCCACCACGC CCGGCTAATT
  TTCTTTAAAT ATTAAATCTT TCACACAAAA AAAAGGAAAA AAAGAAAAAT TTATTCATTA
  TTTCAAATAA GGCAAGACAT GGCTCAGCTA GCACTGGCCA TTGGACAAAA CCTGTCCATC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46090523	mCV23697208	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31983481					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:138800675 () rs orientation: forward

Symbol	Name	Function Class
Lrrc27	leucine rich repeat containing 27	within coordinates
Rr657518	regulatory region 657518	1429 bp distal
Rr657519	regulatory region 657519	119 bp distal
Rr657520	regulatory region 657520	1031 bp proximal
Tssr69706	transcription start site region 69706	140 bp downstream