rs31985651 SNP Detail

Summary

• ID
  rs31985651
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:156737825 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTTG CTTTCAATCT GTGTGTGTGT
  R
  TGTGTTTTAA ACTAACCATA GAACT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45092970	mCV23082994	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss145809038	ENSMUSSNP6243195	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31985651					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:156737825 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ralgps2	Ral GEF with PH domain and SH3 binding motif 2			Intron
				Noncoding-Transcript-Variant
Rr396428	regulatory region 396428			782 bp upstream
Rr421275	regulatory region 421275			168 bp distal
Rr421276	regulatory region 421276			752 bp proximal