rs31985858 SNP Detail

Summary

• ID
  rs31985858
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152117286 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTTGCGCTT CCCACTGAGG
  ATCACGCTGC TCGCCTCATA GCTGACCTGT GGGGAGGGGC GCCATCCAGT GGGGTCATCA
  GCAGCAGGGA ACTGAATGAA GTCTGCCCCT CCCCCACAGT GCCCACCCAG TACAGGGAGG
  ATGCAAAGAG AGCAGGACGC TCTATGGAGT TCAGGGGTGT GGGGATCTGC CTCACAGACA
  R
  GTGAAAGGGC CATGTGGGGT TTTTTTGCTT TTGTTTTTTC GTTTTGTTTT GTTTTGTTGC
  TTTTTTGAGA CAGGGTGTCT CTGTGTAGCC CTAGCTGTCC TGGAACTCAC TCTGTAGACC
  AGGCAGGCCT CGAACTCAGA AATCCGCCTG CCTCTGCCTC CCGAGTGCTG CTGGGATAAA
  AGGCGTGCGC CACCGCCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45594126	mCV24972466	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31985858					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152117286 () rs orientation: forward

Symbol	Name	Function Class
Rr377433	regulatory region 377433	within coordinates
Tas1r1	taste receptor, type 1, member 1	within coordinates
Tssr44802	transcription start site region 44802	1436 bp upstream
Tssr44803	transcription start site region 44803	924 bp downstream