rs31991774 SNP Detail

Summary

• ID
  rs31991774
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:6388266 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCCCACA AAGTCTAAGA
  CCAGTATCAC ACTGTGAGAG TAAACCTGAA GAGGGGGAGT TTCTTGAACT AAAAAATGAC
  ATTGATCAAA AAATGTTTAT TAAACTCCTA AATATAATGA AGCATGGAAA AGTCTATAAT
  TTTTTTTATT TTAGTGTGTA AAGCAGAATT TCGGGAAAGT TGGACCAGGT CTGGCAAGGC
  R
  GCTTTTGTCA AGAGTACGCA TTCTTCTTCC AGATGGCCCG AGTTTGGTTC CCACCACAAG
  TGGGCAGGTC ACATCTGCCT GGGGTTTGAG CTCCAGGGCC CCGATATCTG TTCTTTCTTC
  ATAGGCACCG GCACTCACGT GGGCAGGACC CACCTGCGTC ATTTATTTAA AAAACAGTAA
  CGTTGCAAGG AAAAAGGCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45594587	mCV22885156	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss145961186	ENSMUSSNP5269783	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31991774					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:6388266 () rs orientation: forward

Symbol	Name	Function Class
Sdcbp	syndecan binding protein	within coordinates
Tssr36395	transcription start site region 36395	1195 bp downstream