rs31992269 SNP Detail

Summary

• ID
  rs31992269
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:151025333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATTGTTGGT CCCAACAGAA GAGGGTACCA
  TGGCCACTTC CCTGTGAAGG TGTCCACAGC TCAATGAAGC AAGCCTGAGG GAAAACCGTG
  GTGTGACTCT AATGTGTACT CTGCCCCCAG CCCTCATGGC CAGTCCATGA GCTAGACAGA
  Y
  CTTTCTGAAT AACTATCTTC TAATTAAAAT GGCCATTCAT CTTCTAGTGT TTGAAATGAA
  AATCCTGCCT TAGTTTTCTG GCCACTACCC TTTTAACAGC TGAGCACAGA TGGGGTAGCA
  GAGCACAACA CTCATTAGTA CTCTTTCATT                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45094100	mCV22612748	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss145714266	ENSMUSSNP2124967	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
ss320054284	CHEV_1_152996712	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31992269					SNP	C	C	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:151025333 () rs orientation: forward

Symbol	Name	Function Class
Gm36139	predicted gene, 36139	within coordinates
Gm70948	predicted gene, 70948	1830 bp upstream