rs31992600 SNP Detail

Summary

• ID
  rs31992600
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:45355408 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAG GTGCCAGACC CCTCTTTCTT
  Y
  CCTTTGGCCT CAGAGTCTGG ACCCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46092356	mCV25295235	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31992600					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:45355408 () rs orientation: forward

Symbol	Name	Function Class
Car11	carbonic anhydrase 11	1302 bp downstream
Cpgi19081	CpG island 19081	316 bp distal
Cpgi19082	CpG island 19082	516 bp proximal
Dbp	D site albumin promoter binding protein	within coordinates
Rr400318	regulatory region 400318	969 bp downstream
Tssr66612	transcription start site region 66612	692 bp downstream
Tssr66613	transcription start site region 66613	677 bp downstream
Tssr66614	transcription start site region 66614	635 bp downstream
Tssr66615	transcription start site region 66615	592 bp downstream
Tssr66616	transcription start site region 66616	561 bp downstream
Tssr66617	transcription start site region 66617	531 bp downstream
Tssr66618	transcription start site region 66618	452 bp downstream
Tssr66619	transcription start site region 66619	207 bp upstream
Tssr66620	transcription start site region 66620	246 bp upstream
Tssr66621	transcription start site region 66621	1144 bp upstream
Tssr66622	transcription start site region 66622	1828 bp upstream
Tssr66623	transcription start site region 66623	1915 bp upstream
Tssr72444	transcription start site region 72444	921 bp downstream