rs31993047 SNP Detail

Summary

• ID
  rs31993047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:108082586 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGCT GAGCTGGAAA TTCTGGGAAG
  R
  GCACTCTAGC TTCAGGACTT TAATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45594709	mCV23295350	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss147186545	ENSMUSSNP6790099	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss321252406	CHEV_4_107897994	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31993047					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108082586 () rs orientation: forward

Symbol	Name	Function Class
Gm70134	predicted gene, 70134	within coordinates
Tssr42719	transcription start site region 42719	53 bp upstream
Tssr42720	transcription start site region 42720	1 bp upstream