rs31993494 SNP Detail

Summary

• ID
  rs31993494
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:94291377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGGCAGG GCTATTGGGA
  AATGGTTGTG ACCTAGCAGA AGAACCTCGG ATTCTCACCC AGGTCCCTAA CACATTCTCA
  AAGAAGTCTC AGAGACCTCA AATTATGATC GCTATCAGGT GCAATCTTAA CATCCCTTAA
  TTTATAGGAA ACATGAAAGG CACCACTCAA ATGTCCGTCT CCCATCTGAA ATGCCAACAT
  Y
  GACAACTCCT TTTTTACAAA ACAACCTCCC AGAAAGGGCA TGTGGGTGGT GGAATCCGAG
  GCCAGGGCAT GAGTGTACCA GCACAGATCA TTATCAAAGT ACTGGGGTCA AGGGAAAGGT
  GCAAGTGCAG AGACAAAGAA TATACAGGAA GTAGAGGCAA GTAAGAAACC TGCCTCCATC
  AGGGCTCTGG CACCAGACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47613635	NES11502911	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs31993494					SNP	T	T	T	T	T	T	C	T	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47613635	NES11502911	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:94291377 () rs orientation: forward

Symbol	Name	Function Class
Gm26843	predicted gene, 26843	1236 bp downstream
Gm45708	predicted gene 45708	1228 bp downstream
Rr667812	regulatory region 667812	1874 bp distal