rs31995239 SNP Detail

Summary

• ID
  rs31995239
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:94291890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACTAAACT CAGGGATAAC
  TGCCTTTGGT GAGAGAAAAA ATAAGTTACT GCCTGAGCTA AAAACCACCA GGGACTTGCA
  AGCCCCTCTG TCTGCCAGAG TCAGTGTTTT GCATATGTAC AGTCTCAGGG GATATCTGCT
  CAGCTTGGTG TATGGAATCA GGACAGAGGC CCAATCAGCA TCTATTTAAT TAGGGACAGC
  R
  TGTAACTCAG TAGTAGACCC TTCCTTGTCT ACCACTAGTC CTAGACATAT CTGGGATGGA
  GAACTCTCAA CTGAAAATGT GCCTCCTTCA GATTGGTCCC ATACCAGTGA GACTTTTCTT
  GATTATTGAT GGATTGACAT GGGAGGGCCC AGTGCACTGT GGGTAGTCCC ACTTCTGAGT
  GAGCAGGTGG TCCTCGGATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss47613662	NES11502932	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	A	G	A	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs31995239					SNP	A	A	A	A	G	A	G	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47613662	NES11502932	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:94291890 () rs orientation: forward

Symbol	Name	Function Class
Gm26843	predicted gene, 26843	723 bp downstream
Gm45708	predicted gene 45708	715 bp downstream
Rr667813	regulatory region 667813	1658 bp proximal