rs31995930 SNP Detail

Summary

• ID
  rs31995930
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:25956078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGATATGCA TGGTATCTAA
  TATGTGAGTC CTTCTGCACA GATTGAGAAC CACTGATCTG CTGTATCTCA TCCTGTTTTC
  CACATATCTA TGTATCAAGA CTGACTTCAA AATGCAGATT GTGCTTTTCA TCAGTGGTAG
  AACAGAAGTA GGCAGTACTG TTCAGGAAAA ACAAGCAAAA ACAAAGAATC AGCTGAAAAG
  W
  TTCAGAGGAT GGATATAAGC AGAGAAAACA GATTTCAATA GAGAACAGAG ACTGCAAAGA
  ATAGTCTTGG CAGTCATAGA TACTGGAATA GTTTCAAGGA GCTGCACAGG GTTAGGATCC
  AAGACTGAAT ACCTACACTG ACCACCTCCA ATTATGTATA ACACACTGAA ATTTCGATGT
  GCTATTTCAA AAGTGCCTCA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46092812	mCV24588430	ABI	CRAMUS_MOUSE	f	SNP	T	T	A				A
ss60978837	NES16140055	PERLEGEN	MM_PANEL2	f	SNP			A	A	A	A		T	A	A	A	T	A	A	T
ss148607767	ENSMUSSNP3152950	ENSEMBL	ENSEMBL_Sanger	f	SNP			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs31995930					SNP	T	T	A	A	A	A	A	T	A	A	A	T	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60978837	NES16140055	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:25956078 () rs orientation: forward

Symbol	Name	Function Class
Vmn1r-ps86	vomeronasal 1 receptor, pseudogene 86	1027 bp downstream