rs31996546 SNP Detail

Summary

• ID
  rs31996546
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:8358339 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAG ACTAAAGGTT GGATTCTTCA
  W
  TCCTATATAG AACAGGGAAC AAAAT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45094423	mCV24663440	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	A
ss148536809	ENSMUSSNP5996032	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss319624960	CHEV_1_8278196	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31996546					SNP	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:8358339 () rs orientation: forward

Symbol	Name	Function Class
Gm70752	predicted gene, 70752	1546 bp upstream
Rr407573	regulatory region 407573	358 bp distal