rs31998655 SNP Detail

Summary

• ID
  rs31998655
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:19132347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCACTGGG TACTTTGATC
  CACCTTCTAA GAAGGACCAC ACTTTGGTCT TCCTTTATCT TGAGCCTCAT GTGCTCTGTG
  AATTGTATCT TGGGCAATCT GAGCCTCTAG GCTAATATCC ATGTATTAGT GAGTACATGC
  CATGTGTGTT CTTTTGTGAT TGGGTTACCT CATTCAGGAT TATATTTTTC CAGTTCCATC
  S
  ATTTGCCTAG GAATTTCATA AATTCATTCT TTTTAATAGC TGAGTAGTAC TCCATTGTGC
  AAATGTAAAT TTTCTGTATC CATTCCTCTG TTGAAGGACA ACTGGGTTGT TTCCAACTTC
  TGGCTATTAT AAATAAGGCT GCTATGAACA TTGTGGATCA TGTGTCCTTA TTACATGTTG
  GAGCATCTTC TGGATATATG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45094367	mCV24125224	ABI	CRAMUS_MOUSE	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31998655					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:19132347 () rs orientation: forward

Symbol	Name	Function Class
Gm15825	predicted gene 15825	1177 bp downstream
Gm28344	predicted gene 28344	734 bp upstream