rs31998783 SNP Detail

Summary

• ID
  rs31998783
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:64944791 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGTGGTTTGG GGAAGAAAAG AAAAAAATGG CTTTCAAAGG CATTCAAGAG CAGGATAAGA
  ATGTGACAGT AATTGGTATT TGGAGGCAAT GTAGACCATG ACAATATACA CTGCTGGTAT
  CCATAGAGAG GAACATAGTA TCTACTGAAG AATGCCTCTG GAAGAATAGC TTTAAGAAGT
  AAGTGGTGGC TAAGCAGAAA AGAAAGAGTT ATAGATTATC AAAGAATATT TTTGGGCAGA
  GCAGGTAGAT AAATGACAGT GGAGAGGTTG TAGCAGCTTC CAAAAGAGCT CTCAGTGGAT
  K
  AATCAGAAGT ACCCAGAATG CTCTTCCCTC ACAAGGATGC CCCCAGACCT AGTCATTGGT
  GTGTCCAAGG TGCATTGATG ATAGATCCTA GCTACATCTA ACTTTGTCTA TTCTTCTATT
  TCTCAGAACA AAGAACTAGT GTTGCATCCA TAGTCATTTC ATTCTCTATT ATAATATACA
  TATATTAGAT ATTTATGTAT ACATAAATGC ATACATGAAT ATTATAGATA TTTACACATC
  TATACATATA AATACACATG CAGATACACA CACATATATA TCATTCATAT ACATCATATA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39350194	mCV22703956	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	G
ss148026177	ENSMUSSNP985277	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31998783					SNP	G	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:64944791 () rs orientation: forward

Symbol	Name	Function Class
D15Mit234	DNA Segment, Chr 15, Massachusetts Institute of Technology 234	483 bp distal