rs31999176 SNP Detail

Summary

• ID
  rs31999176
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:180040500 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGG CTGTTGCCAG GTAACTGTGG
  R
  GCGGAGCCTA GACAAAATGC TAACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45094080	mCV24586761	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss146378082	ENSMUSSNP5584649	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31999176					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:180040500 () rs orientation: forward

Symbol	Name	Function Class
Gm37336	predicted gene, 37336	within coordinates
Rr372536	regulatory region 372536	within coordinates
Rr424412	regulatory region 424412	1620 bp distal
Rr424413	regulatory region 424413	1875 bp proximal