rs32001177 SNP Detail

Summary

• ID
  rs32001177
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:117695079 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCAGTGATT AGGGATGCAT
  AAGGGGCTGG CTGGTCTTCC AGACGGCCAG GGCCTGTAGT TCCTGGCAGC AGTGTCAGGA
  GGCTCACTAT TGCTTGTAAC TTCAGCTTCA GGGAATGGGA TGTCCTCTGT TGGCACTCTC
  CCAACCTCTA TTCCACCCCC GTATTATGCA TTCACACACA TACATATAAA TAAAAATTTT
  W
  AAAAACTGGG TGGTGGTGGC ACTCAGGACT TTAATCCCAG TACTTGGGAA GCAGGGGCAA
  GCAGATCTCC TGGGTTGAGC TAGCCCTCAA GCAGTCAAGG CTACACAAAG AAACCCTGTC
  TCGAAAAAGA ATTAAAAGTT TAAAAAAATA AAAACAACAA CAAAAAAAAA AACTTAAAGA
  AAAATCTGCC TGCATACTGC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45595989	mCV24296544	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs32001177					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:117695079 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14668	CpG island 14668	1127 bp distal
Gm17114	predicted gene 17114	within coordinates
Slc6a9	solute carrier family 6 (neurotransmitter transporter, glycine), member 9	within coordinates