rs32001715 SNP Detail

Summary

• ID
  rs32001715
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:24849203 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAGAAACCC TGTCTCGAAA AACCAAAAAA AAAAAAAAAA
  AAAAAAAAAG ATGTGCATTC TAAAACACCT GTGAGTCTAG AGTCTATTGC TATTTTTTTA
  Y
  TCTTTGGTTT TCTGTAATCG ATTCATGTTT TTGGTGTGTC CAGTATTTTA TTCTAACAGC
  TTTATTGAGA GATAATTGAC ATTCACCAAA TTGGAAATA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss47614536	NES10281272	PERLEGEN	MM_PANEL2	f	SNP	C	T	C	T	T	T
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs32001715					SNP	C	T	C	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47614536	NES10281272	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:24849203 () rs orientation: forward

Symbol	Name	Function Class
Tssr45438	transcription start site region 45438	1242 bp upstream
Tssr45439	transcription start site region 45439	1260 bp upstream
Tssr45440	transcription start site region 45440	1277 bp upstream
Tssr45441	transcription start site region 45441	1289 bp upstream
Tssr45442	transcription start site region 45442	1296 bp upstream