rs32003047 SNP Detail

Summary

• ID
  rs32003047
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79160025 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGG AGCACCTGTG TTTTAGGAAC
  R
  GGCAGGTTGG AGACCCTGCA TGCCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46094111	mCV25275473	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G	A
ss145132887	ENSMUSSNP1888429	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		A
ss322278696	CHEV_7_86655163	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32003047					SNP	A	G	G	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79160025 () rs orientation: forward

Symbol	Name	Function Class
A330074H02Rik	RIKEN cDNA A330074H02 gene	85 bp upstream
Cpgi19299	CpG island 19299	816 bp distal
Gm72212	predicted gene, 72212	within coordinates
Mir9-3hg	Mir9-3 host gene	within coordinates
Rr649635	regulatory region 649635	1003 bp distal
Rr649636	regulatory region 649636	368 bp distal
Rr649637	regulatory region 649637	within coordinates
Rr649638	regulatory region 649638	1134 bp proximal