rs32004005 SNP Detail

Summary

• ID
  rs32004005
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106017627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTCTTGAA CAATCTTCTT CTACTTCCCT CATTTCAGGA
  TACAAAGCTT TGCTCATGAC TTCTTTGAGA AACTCAGTGT CCATTACCTC CTGGTGCTCT
  R
  TGTTTATGAG GTCTCTTCTT GGGAAGATCA GTTTGCACTA TAGGTGGTAA CAGAACAAAT
  CCAGCCAGCC AGATGCAGTG CTGCCTTTAG CTTTAGCTAC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47114645	NES11603539	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	A	G	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32004005					SNP	G	G	G	A	G	A	G	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47114645	NES11603539	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106017627 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	within coordinates