rs32004747 SNP Detail

Summary

• ID
  rs32004747
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:106018362 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCACTCTT GAAGGCCTCA
  TGCATTTTCT TGAAATCCTT GGATGCTCTT TGGAATAAGT ACAAGGATAA GTCAATGTTG
  TAGTCTTGGT AAATGTGTAG TCTCTCTCAC AGGGTTCAGA TTTCAGCTCA TTTTCTATGA
  CCCTCAAGAT TTCATGAAAG TAATTCTGAC TGTAATCATG CTTTTATTTC CAAATGTTTT
  Y
  AAGTGTTTCT CTAAATTTTA ACTGAATGTT GTTGGTTGTC TTTTTGATGA ATTCAACATG
  ACAGGTTTCT AAACTCTTTC TAAGTAAAAG GTATTTTTTT TTCATTTGGA TATTTTTGTC
  ATACATGATT TCAAACTTTT CTCCAGACAT TATTTTTAGT CTTTCCACAA TATTTTTGTC
  CTTCTTGAAA TATTCAAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47114657	NES11603545	PERLEGEN	MM_PANEL2	f	SNP				C	T	C	C
ss145611801	ENSMUSSNP3271227	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	FVB/NJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs32004747					SNP	T	T	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47114657	NES11603545	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:106018362 () rs orientation: forward

Symbol	Name	Function Class
Gvin-ps6	GTPase, very large interferon inducible, pseudogene 6	within coordinates